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Generate high-quality single-cell suspensions from mouse brain tissue efficiently and reliably using the STEMprep™ Mouse Brain Dissociation Kit. Designed to work seamlessly with the STEMprep™ Tissue Dissociator, this kit features a precisely formulated enzymatic cocktail tailored for brain tissue, combined with an optimized mechanical dissociation protocol to preserve the integrity and viability of delicate neural cell populations.
This method supports the isolation of key cell types, including microglia, oligodendrocytes, astrocytes, endothelial cells, and neural stem and progenitor cells. The gentle enzymatic digestion helps break down the extracellular matrix while maintaining cellular structure, minimizing user variability and hands-on time.
After dissociation, the resulting sample is suitable for immediate downstream applications such as cell isolation, culture, flow cytometry, and molecular or functional analysis.
For best results, use this kit in conjunction with the STEMprep™ Tissue Dissociator and STEMprep™ Sample Tubes.
For more information on STEMprep™, visit the STEMprep™ overview page. Additionally, explore our instrumentation overview page or download our to learn more about available service options, including warranty coverage and additional support packages.
Figure 1. STEMprep™ Mouse Brain Dissociation Kit Achieves High Cell Viability and Yield
Mouse brain tissue was processed into single-cell suspension using the STEMprep™ Mouse Brain Dissociation Kit and the STEMprep Tissue Dissociator, an alternative automated system, or a manual dissociation method.
(A) Viability of nucleated cells.
(B) Yield of viable cells per whole brain tissue (325 - 395 mg).
(C and D) Proportion and yield of CD45+ immune and CD45- non-immune cells, including CD11b+F4/80+ microglia, O4+ oligodendrocytes, ACSA-2+ astrocytes, and CD31+ endothelial cells. Viability, yield, and subset composition were assessed by flow cytometry. Brain samples were processed with protocol-specific density gradient media to remove myelin and cell debris. Red blood cells were lysed with ammonium chloride solution prior to subset analysis. Data are presented as mean ± SD (n = 21 - 36), * p < 0.05, one-way ANOVA with Tukey's multiple comparisons test.
Figure 2. STEMprep™-Processed Mouse Brain Microglia Are Phagocytic and Produce Cytokines upon Activation
Mouse brain tissue was processed into single-cell suspensions using STEMprep™ Mouse Brain Dissociation Kit and the STEMprep™ Tissue Dissociator, an alternative automated system, or a manual dissociation method. (A) Brain CD11b+ microglia were isolated from the single-cell suspensions using EasySep™ Mouse CD11b+ Positive Selection Kit II. (B) The isolated CD11b+ cells were incubated for 2 hours in the presence of pHrodo™ Green-conjugated E. coli BioParticles™ at 2 - 8°C (Cold) or 37°C. The fluorescence of phagocytosed BioParticles™ was measured by flow cytometry. (C) Intracellular flow cytometry staining of TNF-ɑ production by brain CD11b+ microglia cultured overnight in the presence of 3 µg/mL Brefeldin A and treated with (+) or without (-) 100 ng/mL of lipopolysaccharides (LPS). Data are presented as mean ± SD (n = 4).
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